Browse of TCMCG015C01264 protein

CDS

Accession Number	TCMCG015C01264
gbkey	CDS
Protein Id	XP_027125632.1
Location	complement(join(42111852..42111974,42112188..42112261,42112264..42112285,42112597..42112668,42112770..42112863,42113293..42113493,42113604..42113882,42114375..42114487,42114564..42114663,42114753..42114875,42115209..42115276,42115552..42115707,42115928..42116074,42116203..42116472,42116551..42116635,42116744..42116895,42117013..42117162,42117261..42117314,42117528..42117657,42117770..42117903,42118174..>42118194))
Gene	LOC113742116
GeneID	113742116
Organism	Coffea arabica

Protein

Length	856aa
Molecule type	protein
Topology	linear
Data_file_division	PLN
dblink	BioProject:PRJNA506972
db_source	XM_027269831.1
Definition	LOW QUALITY PROTEIN: DNA repair protein RAD5A-like, partial [Coffea arabica]

EGGNOG-MAPPER Annotation

COG_category	KL
Description	Prokaryotic RING finger family 4
KEGG_TC	-
KEGG_Module	-
KEGG_Reaction	-
KEGG_rclass	-
BRITE	ko00000        [VIEW IN KEGG] ko01000        [VIEW IN KEGG] ko03400        [VIEW IN KEGG]
KEGG_ko	ko:K15505        [VIEW IN KEGG]
EC	-
KEGG_Pathway	-
GOs	GO:0000724        [VIEW IN EMBL-EBI] GO:0000725        [VIEW IN EMBL-EBI] GO:0006139        [VIEW IN EMBL-EBI] GO:0006259        [VIEW IN EMBL-EBI] GO:0006281        [VIEW IN EMBL-EBI] GO:0006302        [VIEW IN EMBL-EBI] GO:0006310        [VIEW IN EMBL-EBI] GO:0006725        [VIEW IN EMBL-EBI] GO:0006807        [VIEW IN EMBL-EBI] GO:0006950        [VIEW IN EMBL-EBI] GO:0006974        [VIEW IN EMBL-EBI] GO:0008150        [VIEW IN EMBL-EBI] GO:0008152        [VIEW IN EMBL-EBI] GO:0009292        [VIEW IN EMBL-EBI] GO:0009294        [VIEW IN EMBL-EBI] GO:0009987        [VIEW IN EMBL-EBI] GO:0033554        [VIEW IN EMBL-EBI] GO:0034641        [VIEW IN EMBL-EBI] GO:0043170        [VIEW IN EMBL-EBI] GO:0044237        [VIEW IN EMBL-EBI] GO:0044238        [VIEW IN EMBL-EBI] GO:0044260        [VIEW IN EMBL-EBI] GO:0044764        [VIEW IN EMBL-EBI] GO:0045003        [VIEW IN EMBL-EBI] GO:0046483        [VIEW IN EMBL-EBI] GO:0050896        [VIEW IN EMBL-EBI] GO:0051704        [VIEW IN EMBL-EBI] GO:0051716        [VIEW IN EMBL-EBI] GO:0071704        [VIEW IN EMBL-EBI] GO:0090304        [VIEW IN EMBL-EBI] GO:1901360        [VIEW IN EMBL-EBI]

Sequence

CDS:   TCCACGAATGCTTGTGGAGAGATTGGCCGCATCCCATATGAATGGGCTCGATGCTTATTACCACTTGTGAGGGACAAGAAAGTTAGAATTGATGGGCATTGTAAATCCGCTCCACCTGTATTAGGAATTATGGACAGCATTATTCTGTCCGTCAGCGTGTATATAAACAGTTCCATGTTCCAAAAGAGCCATCAGGCTTCACTGAAAGCAGCCTCAAATGATGAATCAGTTATTCATCCTCTGCCAACGCTTTTCCAATTGCTGGGGCTCTCTCCTTTTCAGAAGGCAGAATTCACTCCAGGCGATTTGTATACGAAGAAGCGTCCATTGAACTTAGAGGACAGCTTTAATGTCTCTGCACCATTGTTGCCTATTCCTAAATTCAAGAGCCAATCAACTCTAGATGGAAGTAAGATGGAAAATGAGGAGTCAATATCTGACAATGATCTTGACAAAATTGTTGGTGTTGCAGACAGCTCTGAATTACTGGAAATGGGACCTCCAAGTACTCTTCAGTGTGAACTTCATCCATATCAGAAGCAGGCTCTTCATTGGATGATTCAACTTGAGAGGGGCCATTGCCTGGATGAAGCAGCATCAACGTTGCACCCGTGTTGGGATGCATACCGGCTTGCAGACAAAAGGGGGCTTGTTATATACTTGAATGCATTTTCTGGCGATGCAACAACAGAATTTCCAAGCACTCTTCGGATGGCCAGAGGAGGAATTCTGGCAGATTCTATGGGGCTTGGGAAAACTATCATGACCATAGCTCTTCTTCTAACACATTCTGAAAGAGGTGGTTCATTAGGAAACCAATTGACAGCCCAGACTTTGACTGGAAATGGTGAAGCTAGCCTTATTTCAGATCAATCTCCAACGGCAAAAAAAGCGGCAAAAATTTCTGGATTCGAAAAGCTTTTGAAGCCAAAAAACTTTCTCACATGTGGTGGAAACCTTATTATCTGTCCAATGACCCTTATAGGTCAGTGGAAGGCAGAAATTGAAACCCATGCACAACCTGGGACTTTGTCGATTTACATTCACTATGGGCAGAACAGATCAAGGGATGCTCTCGTTCTAGGCCAAAGTGATGTTGTGCTCACAACTTATGGAGTTTTAGCCTCAGAGTTCTCAGCAGAGAATGCTGATGTCACTGGGGGACTCTTCTCAGTGAGATGGTTTAGAGTGGTGCTAGACGAAGCACACACAATAAAGTCTTCAAAAAGCCAAATTTCCATGGCTGCAGCTGCGCTTGTTGCTGATCGTCGATGGTGCCTTACTGGCACCCCTATCCAGAACAACCTAGAAGATCTTTACAGTCTTCTTCGATTTTTGAAGGTGGAACCATGGGGAAGCTGGGCATGGTGGAACAAACTTGTTCAGAAACCTTTTGAGGAGGGTGATGCGCGTAGTTTGAAGTTGGCCCAATCAATATTAAAGCCAATTATGCTAAGAAGAACTAAATCTAGTACTGACAAGGAAGGCAGGCCAATTTTGGTTCTTCCACCTGCTGATATTCAAGTGATATATTGTGAACTTACAGAAGCAGAGAGGGATTTTTATGATGCTTTGTTTAAAAGATCAAAGGTGAAATTTGATAAATTTGTCGAGCAAGGACGTATTCTTCACAATTATGCTTCAATATTGGAGTTGCTCTTGCGTCTTCGTCAATGTTGTGACCATCCATTTTTAGTGATGAGTCGGGGCGACACGCAAGAGTTCTCTGATCTGAATAAGCTCACAAGACGCTTTCTTAAGGTTGGTCAGGACATTGTGGATGGGCAAGCTAGAGATGTACCATCACTGGCTTATGTTGAGGAGGTTGTTGAAGAGTTACGAAAAGGGGAAGTAGGAGAGTGCCCGATATGCCTTGAAGCTTTTGAAGATGCTGTATTGACACCATGTGCTCATAGACTATGCAGAGAATGCCTCTTAGCAAGTTGGCGAAGCTCTACTTCTGGTTTTTGTCCTGTTTGTAGAAAGATGATTACCAAGCAAGAGCTTCTCACAGCTCCTACTCAAAGTCGCTTCCGGATTGATATTGAGAGAAATTGGGTCGAATCATCTAAGGTTTCTGCACTTCTGCATGAACTCGAAATTCTTCGCTTAGCAGGGTCCAAGAGCATTGTTTTCAGCCAGTGGACTGCCTTTCTTGATCTATTGCAGATTGCTTTTTCTCGGAGTGATATTCAATTTCTTCGTCTGGATGGGACCCTTAACCAGCAACAACGTGAGAAAGTAATAAAGCAATTCTCAGAGGAAGATAACATCATGGTTTTGCTAATGTCATTGAAGGCTGGGGGAGTTGGGATCAACTTAACAGCTGCATCCAACGCTTTTGTCTTGGATCCCTGGTGGAACCCAGCCGGAGAACAAGCTGTAATGCGCGTTCACCGCATTGGACAAACTGAAAAAGTAATGATCAAAAGGTTCATCATGAAGGGAACTGTAGAAGAAAGAATGGAAGCAGTGCAAGCACGCAAACAACGGATGATTTCTGGTGCTTTGACTGACCAAGAAGTTAGATCAGCACGCATCGAGGAGCTTAAGATGCTTTTCGCTTAA

Protein:   STNACGEIGRIPYEWARCLLPLVRDKKVRIDGHCKSAPPVLGIMDSIILSVSVYINSSMFQKSHQASLKAASNDESVIHPLPTLFQLLGLSPFQKAEFTPGDLYTKKRPLNLEDSFNVSAPLLPIPKFKSQSTLDGSKMENEESISDNDLDKIVGVADSSELLEMGPPSTLQCELHPYQKQALHWMIQLERGHCLDEAASTLHPCWDAYRLADKRGLVIYLNAFSGDATTEFPSTLRMARGGILADSMGLGKTIMTIALLLTHSERGGSLGNQLTAQTLTGNGEASLISDQSPTAKKAAKISGFEKLLKPKNFLTCGGNLIICPMTLIGQWKAEIETHAQPGTLSIYIHYGQNRSRDALVLGQSDVVLTTYGVLASEFSAENADVTGGLFSVRWFRVVLDEAHTIKSSKSQISMAAAALVADRRWCLTGTPIQNNLEDLYSLLRFLKVEPWGSWAWWNKLVQKPFEEGDARSLKLAQSILKPIMLRRTKSSTDKEGRPILVLPPADIQVIYCELTEAERDFYDALFKRSKVKFDKFVEQGRILHNYASILELLLRLRQCCDHPFLVMSRGDTQEFSDLNKLTRRFLKVGQDIVDGQARDVPSLAYVEEVVEELRKGEVGECPICLEAFEDAVLTPCAHRLCRECLLASWRSSTSGFCPVCRKMITKQELLTAPTQSRFRIDIERNWVESSKVSALLHELEILRLAGSKSIVFSQWTAFLDLLQIAFSRSDIQFLRLDGTLNQQQREKVIKQFSEEDNIMVLLMSLKAGGVGINLTAASNAFVLDPWWNPAVXEQAVMRVHRIGQTEKVMIKRFIMKGTVEERMEAVQARKQRMISGALTDQEVRSARIEELKMLFA